課程信息
4.9
13 個評分
4 個審閱

100% 在線

立即開始,按照自己的計劃學習。

可靈活調整截止日期

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中級

完成時間大約為14 小時

建議:4-5 hours/week...

英語(English)

字幕:英語(English)

100% 在線

立即開始,按照自己的計劃學習。

可靈活調整截止日期

根據您的日程表重置截止日期。

中級

完成時間大約為14 小時

建議:4-5 hours/week...

英語(English)

字幕:英語(English)

教學大綱 - 您將從這門課程中學到什麼

1
完成時間為 2 小時

The Library of Integrated Network-based Cellular Signatures (LINCS) Program Overview

This module provides an overview of the concept behind the LINCS program; and tutorials on how to get started with using the LINCS L1000 dataset....
8 個視頻 (總計 78 分鐘), 2 個閱讀材料
8 個視頻
The Connectivity Map8分鐘
Geometrical View of the Connectivity Map Concept3分鐘
LINCS Data and Signature Generation Centers12分鐘
BD2K-LINCS Data Coordination and Integration Center4分鐘
Induced Pluripotent Stem Cells (iPSCs)4分鐘
Introduction to LINCS L1000 Data22分鐘
L1000 Characteristic Direction Signature Search Engine (L1000CDS2) Demo13分鐘
2 個閱讀材料
Syllabus10分鐘
Grading and Logistics10分鐘
完成時間為 26 分鐘

Metadata and Ontologies

This module includes a broad high level description of the concepts behind metadata and ontologies and how these are applied to LINCS datasets....
2 個視頻 (總計 26 分鐘)
2 個視頻
Introduction to Metadata and Ontologies | Part 220分鐘
完成時間為 24 分鐘

Serving Data with APIs

In this module we explain the concept of accessing data through an application programming interface (API)....
2 個視頻 (總計 19 分鐘)
2 個視頻
Accessing and Serving Data through RESTful APIs | Part 210分鐘
2
完成時間為 19 分鐘

Bioinformatics Pipelines

This module describes the important concept of a Bioinformatics pipeline....
1 個視頻 (總計 14 分鐘)
完成時間為 1 小時

The Harmonizome

This module describes a project that integrates many resources that contain knowledge about genes and proteins. The project is called the Harmonizome, and it is implemented as a web-server application available at: http://amp.pharm.mssm.edu/Harmonizome/ ...
4 個視頻 (總計 37 分鐘)
4 個視頻
Processing Datasets | Part 18分鐘
Processing Datasets | Part 29分鐘
Processing Datasets | Part 37分鐘
3
完成時間為 24 分鐘

Data Normalization

This module describes the mathematical concepts behind data normalization....
2 個視頻 (總計 19 分鐘)
2 個視頻
Data Normalization | Part 213分鐘
完成時間為 1 小時

Data Clustering

This module describes the mathematical concepts behind data clustering, or in other words unsupervised learning - the identification of patterns within data without considering the labels associated with the data. ...
3 個視頻 (總計 33 分鐘)
3 個視頻
Data Clustering | Part 2 | Distance Functions 12分鐘
Data Clustering | Part 3 | Algorithms and Evaluation15分鐘
完成時間為 2 小時

Midterm Exam

The Midterm Exam consists of 45 multiple choice questions which covers modules 1-7. Some of the questions may require you to perform some analysis with the methods you learned throughout the course on new datasets. ...
1 個測驗
1 個練習
Midterm Exam30分鐘
4
完成時間為 29 分鐘

Enrichment Analysis

This module introduces the important concept of performing gene set enrichment analyses. Enrichment analysis is the process of querying gene sets from genomics and proteomics studies against annotated gene sets collected from prior biological knowledge....
3 個視頻 (總計 29 分鐘)
3 個視頻
Enrichment Analysis | Part 27分鐘
Enrichr Demo9分鐘
完成時間為 1 小時

Machine Learning

This module describes the mathematical concepts of supervised machine learning, the process of making predictions from examples that associate observations/features/attribute with one or more properties that we wish to learn/predict....
3 個視頻 (總計 27 分鐘)
3 個視頻
Introduction to Machine Learning | Part 2 8分鐘
Introduction to Machine Learning | Part 39分鐘
4.9
4 個審閱Chevron Right

熱門審閱

創建者 MSJan 21st 2017

A very practical courses. Very good introduction to Big Data sources and Computational Analysis tool.

創建者 HHSep 19th 2018

excellent oppurtunity for the data science learners

講師

Avatar

Avi Ma’ayan, PhD

Director, Mount Sinai Center for Bioinformatics
Professor, Department of Pharmacological Sciences

關於 西奈山伊坎医学院

The Icahn School of Medicine at Mount Sinai, in New York City is a leader in medical and scientific training and education, biomedical research and patient care....

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