Access Bioinformatics Databases with Biopython

提供方
Coursera Project Network
在此指導項目中,您將:

Sequence alignment using NCBI-BLAST

Fetch PUBMED & Nucleotide sequence using ENTREZ, PDB, EXPASY

Access KEGG pathways and genes

Clock1 hour
Intermediate中級
Cloud無需下載
Video分屏視頻
Comment Dots英語(English)
Laptop僅限桌面

In this 1-hour long project-based course, you will learn how to access, parse, and visualize data from various bioinformatics sequence and structural online databases such as ENTREZ, PDB, KEGG and NCBI using Biopython. You will also interact with various bioinformatics file formats such as FASTA, PDB, GENBANK and XML along with various parsers to read and modify these files using Biopython. Note: This course works best for learners who are based in the North America region. We’re currently working on providing the same experience in other regions.

您要培養的技能

  • Bioinformatics
  • Python Programming
  • access biological database

分步進行學習

在與您的工作區一起在分屏中播放的視頻中,您的授課教師將指導您完成每個步驟:

  1. Sequence alignment using NCBI-BLAST

  2. Fetch PUBMED & Nucleotide sequence using ENTREZ

  3. Fetch proteins from PDB

  4. PROSITE & SCANPROSITE from EXPASY

  5. Access KEGG database

指導項目工作原理

您的工作空間就是瀏覽器中的雲桌面,無需下載

在分屏視頻中,您的授課教師會為您提供分步指導

常見問題

常見問題

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