3D SARS-CoV-19 Protein Visualization With Biopython

4.6
54 個評分
提供方
Coursera Project Network
在此指導項目中,您將:

Biological sequence/ Data manipulation with Biopython

Query Biological Databases using Biopython & web-scraping

Create an interactive 3D model of SARS-CoV-19 Protein

Clock2 hours
Intermediate中級
Cloud無需下載
Video分屏視頻
Comment Dots英語(English)
Laptop僅限桌面

In this project you will create an interactive three-dimensional (3D) representation of SARS-CoV-19 (Coronavirus) protein structures & publication-quality pictures of the same, understand properties of SARS-CoV-19 genome, handle biological sequence data stored in FASTA & PDB (Protein Data Bank) and XML format, and get insights from this data using Biopython. This hands-on project will also give you a glimpse of tasks a Bioinformatician performs on a daily basis, along with the up-to-date concepts and database use cases in the field of Medical Research and Human genetics. In this project, we will also cover basics about important databases used by biologists and biotechnologists, along with the type of sequence data we can access and visualize from these databases using Biopython & Jupyter notebook.

您要培養的技能

  • SARS-CoV-19
  • Biopython
  • Python Programming
  • Bioinformatics
  • Biotechnology

分步進行學習

在與您的工作區一起在分屏中播放的視頻中,您的授課教師將指導您完成每個步驟:

  1. Introduction to Biopython

  2. Understand FASTA file format

  3. Sequence manipulation using Biopython

  4. Transcription & Translation studies

  5. Perform Basic Local Alignment using NCBI-BLAST

  6. Reading PDB file

  7. Visualizing SARS-CoV-19 Protein structures

指導項目工作原理

您的工作空間就是瀏覽器中的雲桌面,無需下載

在分屏視頻中,您的授課教師會為您提供分步指導

授課教師

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